Publications
When citing a core facility, please ensure that you are referencing their Research
Resource Identifier (RRID) number, and funding source. Authors should reach out to
the facility manager if you are unsure how to acknowledge a specific instrument. Citation
examples for the CBE facilities are provided below:
Bioimaging
"Imaging was made possible by the Center for Biofilm Engineering (RRID:SCR_026519),
which is supported by funding from the National Science Foundation. M.J. Murdock Charitable
Trust, the US Department of Defense and Montana State University".
Analytical
"Analytical analysis was made possible by the Center for Biofilm Engineering (RRID:SCR_026519),
which is supported by funding from the National Science Foundation. M.J. Murdock Charitable
Trust, the US Department of Defense and Montana State University".
Please check with the facility managers for specific funding details, if needed.
2025 Publications
*Thornton IJ, Zimlich KR, Fields MW, Wilking JN (Sep 2025). Characterizing Spatioemporal
Microbial Colony Distributions in Printed PEG-DA Hydrogel Films. Biomed. Mater. DOI
10.1088/1748-605X/ae066e.
*Chaverra M, Toney JP, Dardenne-Ankringa LD, Knee JT, Morris AR, Wadhams JB, Certel
SJ, Stowers RS (Jul 2025). Two classes of amine-glutamate multi-transmitter neurons
innervate Drosophila internal male reproductive organs. bioRxiv [Preprint]. 2025 Jul
28:2025.07.23.666348. [Version 1] doi: 10.1101/2025.07.23.666348
Stowers RS. Multimerized epitope tags for high-sensitivity protein detection, G3 Genes|Genomes|Genetics,
Volume 15, Issue 6, June 2025, jkaf070, https://doi.org/10.1093/g3journal/jkaf070
Ketteler HM, Johnson EL, McGlennen M, Dieser M, Foreman CM, Warnat S (2025 Jun). A
simulated microgravity biofilm reactor with integrated microfabricated sensors: Advancing
biofilm studies in near-space conditions. Biofilm, 9(), 100263. . ID: 40083859.
Brown K, Vahidi G, Hislop BD, Moody M, Watson S, Welhaven HD, Behzad R, Paton KO,
Karim L, June RK, Martin SA, Heveran CM (2025 June 3). Short-term high-fat diet impacts bone material properties and metabolism for adult
and aged C57BL/6JN mice. Commun Biol 8, 850. https://doi.org/10.1038/s42003-025-08263-w
Schaible GA, Cliff JB, Crandall JA, Bougoure JJ, Mathuri MN, Sessions AL, Atwood J,
Hatzenpichler R (2025 May 30). Comparing Raman and NanoSIMS for heavy water labeling
of single cells. Microbiology spectrum, (), e0165924. doi: 10.1128/spectrum.01659-24.
ID: 40445204.
Pettygrove BA, Nygaard TK, Borgogna TR, Malachowa N, Gaur G, Salo SE, Pallister KB,
Burroughs O, Robinson C, Gao A, Sturdevant DE, Ricklefs S, DeLeo FR, Otto M, Stewart
PS, Voyich JM (2025 May 20). Staphylococcus aureus SaeR/S-regulated factors overcome
human complement-mediated inhibition of aggregation to evade neutrophil killing. Proceedings
of the National Academy of Sciences of the United States of America, 122(20), e2412447122.
. ID: 40359050.
Viles E, Heyneman E, Lin S, Montague V, Darabi A, Cox LM, Phillips A, Gerlach R, Espinosa-Ortiz
EJ, Heveran C (April 2025). Mycelium as a scaffold for biomineralized engineered living
materials, Cell Reports Physical Science, Volume 6, Issue 4, 102517, ISSN 2666-3864,
https://doi.org/10.1016/j.xcrp.2025.102517.
Fricke MS, Frometa MR, Kerkhoff Y, Bernhard SP, Tahir RS, Quaas E, Totten WH, Haag
R, Achazi K, Cloninger MJ (2025 Apr 10). The toxicity, uptake, and impact on galectin-3
mediated apoptosis of lactose functionalized PAMAM dendrimers. Mater. Adv., 2025,6,
3171-3184.
Cherne MD, Snyder D, Sidar B, Blackwell K, Jenkins B, Huang S, Sebrell TA, Hedges
JF, Spence JR, Chang CB, Wilking JN, Walk ST, Jutila MA, Loveday EK, Bimczok D (2025
Mar 28). Strain- and vaccine-specific effects of serum antibodies in the protection
of intestinal SARS-CoV-2 infection. medRxiv : the preprint server for health sciences,
(), . . ID: 40196264.
Koepnick HR, Peyton BM, Lauchnor EG. Factors influencing the efficacy of microbial
remediation of selenium in groundwater near a coal-fired power plant. Geo-Bio Interfaces. 2025;2:e7. doi:10.1180/gbi.2025.3
Anjum S, Parks K, Clark K, Parker A, Heveran CM, Gerlach R (2025 Jan 27). Strengthening
biopolymer adhesives through ureolysis-induced calcium carbonate precipitation. Sci Rep 15, 3453. https://doi.org/10.1038/s41598-024-84087-8
Stewart PS, Kim J, James G, Yi F, Stechmiller J, Weaver M, Kelly DL, Fisher S, Schultz
G, Lyon D (2024 Nov-Dec). Association of biofilm and microbial metrics with healing
rate in older adults with chronic venous leg ulcers. Wound repair and regeneration
: official publication of the Wound Healing Society [and] the European Tissue Repair
Society, 32(6), 858-871. . ID: 39425525.
Gaur G, Predtechenskaya M, Voyich JM, James G, Stewart PS, Borgogna TR. Assessing
the Effects of Surgical Irrigation Solutions on Human Neutrophil Interactions with
Nascent Staphylococcus aureus Biofilms. Microorganisms. Sep 2024; 12(10):1951. https://doi.org/10.3390/microorganisms12101951
Vahidi G, Boone C, Hoffman F, Heveran C (2024 Sep). Aging decreases osteocyte peri-lacunar-canalicular
system turnover in female C57BL/6JN mice. Bone, 186(), 117163. . ID: 38857854.
Buckner E, Buckingham-Meyer K, Miller LA, Parker AE, Jones CJ, Goeres DM (2024 Aug).
Coupon position does not affect Pseudomonas aeruginosa and Staphylococcus aureus biofilm
densities in the CDC biofilm reactor. Journal of microbiological methods, 223(), 106960.
doi: 10.1016/j.mimet.2024.106960. ID: 38788980.
Kohtz AJ, Petrosian N, Krukenberg V, Jay ZJ, Pilhofer M, Hatzenpichler R (2024 Aug).
Cultivation and visualization of a methanogen of the phylum Thermoproteota. Nature,
632(8027), 1118-1123. doi: 10.1038/s41586-024-07631-6. ID: 39048824.
Lyon K, Bansil R, Bimczok D (2024 Jul 5). Profiling Luminal pH in Three-Dimensional
Gastrointestinal Organoids Using Microelectrodes. Journal of visualized experiments
: JoVE, (209), . doi: 10.3791/66900. ID: 39037269.
Schaible GA, Jay ZJ, Cliff J, Schulz F, Gauvin C, Goudeau D, Malmstrom RR, Ruff SE,
Edgcomb V, Hatzenpichler R (2024 Jul). Multicellular magnetotactic bacteria are genetically
heterogeneous consortia with metabolically differentiated cells. PLoS biology, 22(7),
e3002638. . ID: 38990824.
Miller IR, Bui H, Wood JB, Fields MW, Gerlach R (2024 Jun). Understanding phycosomal
dynamics to improve industrial microalgae cultivation. Trends in biotechnology, 42(6),
680-698. doi: 10.1016/j.tibtech.2023.12.003. ID: 38184438.
Gunyol P, Khosravi MK, Phillips A, Plymesser K, Parker A. Effect of Fines Content
on Calcium Carbonate Precipitation and Thermal Properties of Biocemented Sand (Apr
2024). J. Geotech. Geoenviron. Eng. Vol 150 (7). https://doi.org/10.1061/JGGEFK.GTENG-11925
Ugur GE, Rux K, Boone JC, Seaman R, Avci R, Gerlach R, Phillips A, Heveran C (2024
Jan 17). Biotrapping Ureolytic Bacteria on Sand to Improve the Efficiency of Biocementation.
ACS applied materials & interfaces, 16(2), 2075-2085. doi: 10.1021/acsami.3c13971.
ID: 38176018.
Fredrikson JP, Brahmachary PP, June RK, Cox LM, Chang CB (2024 Jan). Pericellular
Matrix Formation and Atomic Force Microscopy of Single Primary Human Chondrocytes
Cultured in Alginate Microgels. Advanced biology, 8(1), e2300268. . ID: 37688354.